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Nature Methods
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The Image Data Resource: A Bioimage Data Integration and Publication Platform.
cell-imaging ·
DOI 10.1038/nmeth.4326
· Nature Methods · 336 citations
imaging
database
Jun 2017
Deep generative modeling for single-cell transcriptomics.
single-cell ·
DOI 10.1038/s41592-018-0229-2
· Nature Methods · 2804 citations
single-cell
probabilistic
Nov 2018
scGen predicts single-cell perturbation responses.
single-cell ·
DOI 10.1038/s41592-019-0494-8
· Nature Methods · 734 citations
single-cell
perturbation
Jul 2019
Cellpose: a generalist algorithm for cellular segmentation.
cell-imaging ·
DOI 10.1038/s41592-020-01018-x
· Nature Methods · 4604 citations
imaging
segmentation
Dec 2020
scGPT: toward building a foundation model for single-cell multi-omics using generative AI.
single-cell ·
DOI 10.1038/s41592-024-02201-0
· Nature Methods · 1223 citations
single-cell
transcriptomics
Feb 2024
Large-scale foundation model on single-cell transcriptomics.
single-cell ·
DOI 10.1038/s41592-024-02305-7
· Nature Methods · 539 citations
single-cell
transcriptomics
Jun 2024
Nucleotide Transformer: building and evaluating robust foundation models for human genomics.
genomics ·
DOI 10.1038/s41592-024-02523-z
· Nature Methods · 472 citations
dna
genomics
Nov 2024
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