Atlas
Models, datasets, benchmarks and papers for biomedical research, each with its source and licence.
Recent models
All models| Name | Domain | Licence | Added |
|---|---|---|---|
| single-cell/rbio rbio1 is a 3B biology reasoning model from the Chan Zuckerberg Initiative, post-trained from Qwen2.5-3B-Instruct by reinforcement learning (GRPO) with… | Single-cell | Other | 2026-10-11 |
| bio-nlp/gemma-3-27b-meditronfo-amharic An Amharic-language variant of Gemma-3-27B-MeditronFO, from EPFL's LiGHT laboratory and the MeditronFO pipeline. | Clinical | — | 2026-10-11 |
| bio-nlp/gemma-3-27b-meditronfo A medical specialisation of Gemma-3-27B-it, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette… | Clinical | gemma | 2026-10-11 |
| bio-nlp/eurollm-9b-meditronfo A medical specialisation of EuroLLM-9B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette… | Clinical | apache-2.0 | 2026-10-11 |
| bio-nlp/eurollm-22b-meditronfo A medical specialisation of EuroLLM-22B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette… | Clinical | apache-2.0 | 2026-10-11 |
| bio-nlp/olmo-2-32b-meditronfo A medical specialisation of OLMo-2-32B, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette examples)… | Clinical | apache-2.0 | 2026-10-11 |
| bio-nlp/apertus-8b-meditronfo A medical specialisation of Apertus-8B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette… | Clinical | apache-2.0 | 2026-10-11 |
| bio-nlp/apertus-70b-meditronfo A medical specialisation of Apertus-70B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette… | Clinical | apache-2.0 | 2026-10-11 |
Recent datasets
All datasets| Name | Domain | Licence | Added |
|---|---|---|---|
| single-cell/10x-genomics-datasets The public demonstration datasets 10x Genomics publishes for its platforms: single-cell gene expression, immune profiling, ATAC and multiome (Chromium), and… | Single-cell | cc-by-4.0 | 2026-10-11 |
| genomics/synapse-data-repository Synapse is a collaborative, open-source research platform that allows teams to share data, track analyses, and collaborate. | Genomics | — | 2026-10-11 |
| bio-nlp/fully-open-meditron The training corpus of Fully Open Meditron (EPFL, LiGHT laboratory): about 601k examples ( 150M tokens) for supervised fine-tuning of clinical LLMs. | Clinical | apache-2.0 | 2026-10-11 |
| genomics/sars-cov-2-wuhan-hu-1 The complete SARS-CoV-2 reference genome and its gene annotation, in two files small enough to open in a browser. | Genomics | — | 2026-09-22 |
| cell-imaging/biostudies-database The BioStudies database holds descriptions of biological studies, links to data from these studies in other databases at EMBL-EBI or outside, as well as data… | Imaging | — | 2026-08-07 |
| cell-imaging/image-data-resource Image Data Resource (IDR) is an online, public data repository that seeks to store, integrate and serve image datasets from published scientific studies. | Imaging | — | 2026-08-07 |