Models
rbio1 is a 3B biology reasoning model from the Chan Zuckerberg Initiative, post-trained from Qwen2.5-3B-Instruct by reinforcement learning (GRPO) with…
An Amharic-language variant of Gemma-3-27B-MeditronFO, from EPFL's LiGHT laboratory and the MeditronFO pipeline.
A medical specialisation of Gemma-3-27B-it, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette…
A medical specialisation of EuroLLM-9B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette…
A medical specialisation of EuroLLM-22B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette…
A medical specialisation of OLMo-2-32B, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette examples)…
A medical specialisation of Apertus-8B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette…
A medical specialisation of Apertus-70B-Instruct, fine-tuned on the Fully Open Meditron corpus (about 601k clinician-vetted medical QA and clinical-vignette…
Baichuan-M3 is a clinical large language model from Baichuan Inc., a 235B mixture-of-experts model built on Qwen3-235B-A22B.
MedGemma 1.5 is Google's 4B multimodal medical model, built on Gemma 3.
Cell2Sentence-Scale (C2S-Scale) model from the van Dijk lab (Yale) and Google, fine-tuned from Gemma 2 27B.
Cell2Sentence-Scale (C2S-Scale) model from the van Dijk lab (Yale) and Google, fine-tuned from Gemma 2 2B.
TxGemma is a family of Google models fine-tuned from Gemma 2 on therapeutic-development tasks from the Therapeutics Data Commons (TDC), covering small…
TxGemma is a family of Google models fine-tuned from Gemma 2 on therapeutic-development tasks from the Therapeutics Data Commons (TDC), covering small…
TxGemma is a family of Google models fine-tuned from Gemma 2 on therapeutic-development tasks from the Therapeutics Data Commons (TDC), covering small…
TxGemma is a family of Google models fine-tuned from Gemma 2 on therapeutic-development tasks from the Therapeutics Data Commons (TDC), covering small…
TxGemma is a family of Google models fine-tuned from Gemma 2 on therapeutic-development tasks from the Therapeutics Data Commons (TDC), covering small…
Biomni-R0-32B-Preview is a biomedical AI agent model from Stanford (Leskovec lab): Qwen3-32B trained by multi-turn reinforcement learning inside the Biomni…
Intern-S2-Preview-397B is the largest Intern-S2 preview from Shanghai AI Laboratory (InternLM): a 397B multimodal model for scientific reasoning and…
Intern-S2-Preview is a 35B multimodal scientific foundation model from Shanghai AI Laboratory (InternLM), trained on hundreds of professional scientific tasks…
Intern-S1-Pro is a trillion-parameter mixture-of-experts multimodal scientific reasoning model from Shanghai AI Laboratory (InternLM): 1T parameters in 512…
Intern-S1-mini is the lightweight Intern-S1 from Shanghai AI Laboratory (InternLM): an 8B Qwen3 language model with a 0.3B InternViT vision encoder, further…
Intern-S1 is an open multimodal scientific reasoning model from Shanghai AI Laboratory (InternLM): a Qwen3-235B mixture-of-experts language model with a 6B…
A lexical baseline that scores a biomedical abstract against a fixed set of therapeutic areas.
A deterministic calculator rather than a learned model: average mass from an amino-acid sequence.
AI Toolkit for Healthcare Imaging
This is a convenient code wrapper to run Lundberg lab SubCell model in inference with your own images
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
Message Passing Neural Networks for Molecule Property Prediction
Official Repository for the Uni-Mol Series Methods
Single cell perturbation prediction
The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell level.
GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations
State is a machine learning model that predicts cellular perturbation response across diverse contexts
Deep probabilistic analysis of single-cell and spatial omics data
A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies…
UCE is a zero-shot foundation model for single-cell gene expression data
Source code repository mirrored from GitHub (biomap-research/scFoundation).
Source code repository mirrored from GitHub (bowang-lab/scGPT).
A deep learning-based tool to identify splice variants
Code for running RFdiffusion
Source code repository mirrored from GitHub (dauparas/LigandMPNN).
Code for the ProteinMPNN paper
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Channel-agnostic image encoding model CA-MAE with a ViT-S/16 encoder backbone designed for microscopy image featurization.
MoLFormer is a class of models pretrained on SMILES string representations of up to 1.1B molecules from ZINC and PubChem.
State Embedding model checkpoints are meant to be used with the Arc State
Geneformer Geneformer is a foundational transformer model pretrained on a large-scale corpus of human single cell transcriptomes to enable context-aware…
The code for using the CodonFM model checkpoint is available in the official Github